Git as lab notebook for (computational) biologists

Git as lab notebook for (computational) biologists

Git is the TV of the computational living room: all the furniture is pointing at it. However, as a biologist, I have been struggling on how to integrate my biological approach into my Git workflow....

27 Nov 2021

Organisation tools as a PhD student: GTD with Todoist

Organisation tools as a PhD student: GTD with Todoist

In this post I would like to talk about how I organise my tasks and plan my day as a Ph.D. student in a biology laboratory. I am pretty sure you have heard or are...

19 May 2019

Setting-up Jupyter Notebook with IRkernel

Setting-up Jupyter Notebook with IRkernel

I decided to try the jupyter notebooks for two reasons. First is that I am a bit tired of programming in the RStudio RMarkdown notebooks where, I noticed, computational time is longer than direct input...

27 Oct 2018